Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | DWY53_16630 | Not Available | Negative | 3825424 - 3826215 | 29090.7 |
| hypothetical protein | DWY53_16635 | Not Available | Negative | 3826363 - 3826944 | 22648.9 |
| hypothetical protein | DWY53_16640 | Not Available | Negative | 3826963 - 3827313 | 13835.7 |
| hypothetical protein | DWY53_16665 | Not Available | Negative | 3829648 - 3830121 | 18086.9 |
| hypothetical protein | DWY53_16670 | Not Available | Positive | 3830534 - 3831505 | 36937.0 |
| hypothetical protein | DWY53_16675 | Not Available | Positive | 3831493 - 3832278 | 29701.3 |
| serine/threonine protein phosphatase | DWY53_16680 | Not Available | Positive | 3832275 - 3833036 | 29475.6 |
| mate family efflux transporter | DWY53_16685 | Not Available | Positive | 3833230 - 3834582 | 49566.6 |
| crp/fnr family transcriptional regulator | DWY53_16690 | Not Available | Positive | 3834618 - 3835202 | 22223.6 |
| carbonic anhydrase | DWY53_16695 | Not Available | Positive | 3835393 - 3835932 | 19937.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

