Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1653 domain-containing protein | DWY53_16475 | Not Available | Positive | 3808668 - 3809468 | 30739.1 |
| histidine phosphatase family protein | DWY53_16480 | Not Available | Positive | 3809368 - 3810042 | 25795.9 |
| duf1294 domain-containing protein | DWY53_16485 | Not Available | Positive | 3810060 - 3810338 | 10659.8 |
| flavin oxidoreductase | DWY53_16490 | Not Available | Positive | 3810359 - 3810922 | 20856.2 |
| hypothetical protein | DWY53_16495 | Not Available | Positive | 3810934 - 3811602 | 25951.9 |
| pyridoxamine 5'-phosphate oxidase family protein | DWY53_16500 | Not Available | Positive | 3811605 - 3812120 | 19131.9 |
| dna alkylation repair protein | DWY53_16505 | Not Available | Positive | 3812166 - 3812846 | 26762.5 |
| hypothetical protein | DWY53_16510 | Not Available | Positive | 3813064 - 3813627 | 21346.2 |
| nucleotidyl transferase abieii/abigii toxin family protein | DWY53_16515 | Not Available | Positive | 3813624 - 3814499 | 33941.6 |
| metallophosphoesterase | DWY53_16520 | Not Available | Positive | 3814492 - 3815304 | 31598.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

