Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4248 domain-containing protein | DWY53_16220 | Not Available | Positive | 3755290 - 3755484 | 7367.08 |
| hypothetical protein | DWY53_16225 | Not Available | Positive | 3755583 - 3755813 | 8466.19 |
| dna-binding protein | DWY53_16230 | Not Available | Positive | 3755853 - 3756347 | 18040.5 |
| n-acetylmuramoyl-l-alanine amidase | DWY53_16235 | Not Available | Positive | 3756795 - 3757313 | 19565.6 |
| hypothetical protein | DWY53_16240 | Not Available | Negative | 3757572 - 3758195 | 23519.9 |
| helix-turn-helix domain-containing protein | DWY53_16245 | Not Available | Negative | 3758219 - 3758738 | 20183.7 |
| molecular chaperone dnak | DWY53_16250 | Not Available | Negative | 3758942 - 3760855 | 68301.1 |
| meta domain-containing protein | DWY53_16255 | Not Available | Negative | 3761184 - 3761975 | 28653.9 |
| hypothetical protein | DWY53_16260 | Not Available | Positive | 3762100 - 3763353 | 47788.1 |
| saccharopine dehydrogenase family protein | DWY53_16265 | Not Available | Positive | 3763437 - 3764630 | 44965.5 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

