Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | DWY53_16120 | Not Available | Negative | 3733798 - 3734712 | 32988.3 |
| duf1015 domain-containing protein | DWY53_16125 | Not Available | Negative | 3734949 - 3736196 | 47087.9 |
| 3-phosphoglycerate dehydrogenase | DWY53_16130 | Not Available | Negative | 3736305 - 3737225 | 33087.2 |
| phosphoserine aminotransferase | DWY53_16135 | Not Available | Negative | 3737333 - 3738403 | 39557.6 |
| atp-dependent helicase | DWY53_16140 | Not Available | Negative | 3738658 - 3739977 | 49651.0 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | DWY53_16145 | Not Available | Negative | 3740068 - 3741342 | 47033.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | DWY53_16150 | Not Available | Negative | 3741361 - 3741957 | 21276.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DWY53_16155 | Not Available | Negative | 3741982 - 3742620 | 23121.2 |
| na(+)-translocating nadh-quinone reductase subunit c | DWY53_16160 | Not Available | Negative | 3742639 - 3743313 | 24676.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | DWY53_16165 | Not Available | Negative | 3743327 - 3744535 | 43523.9 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

