Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_01365 | Not Available | Positive | 363890 - 364738 | 33883.5 |
| glucose-1-phosphate cytidylyltransferase | DWY53_01370 | Not Available | Positive | 364910 - 365683 | 29550.4 |
| cdp-glucose 4,6-dehydratase | DWY53_01375 | Not Available | Positive | 365703 - 366803 | 41174.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DWY53_01380 | Not Available | Positive | 366803 - 367234 | 16064.2 |
| nad(p)-dependent oxidoreductase | DWY53_01385 | Not Available | Positive | 367248 - 368159 | 34164.0 |
| hypothetical protein | DWY53_01390 | Not Available | Positive | 368152 - 369435 | 49388.0 |
| acyltransferase | DWY53_01395 | Not Available | Positive | 369453 - 370478 | 39607.9 |
| flippase | DWY53_01400 | Not Available | Positive | 370498 - 371940 | 53712.2 |
| hypothetical protein | DWY53_01405 | Not Available | Positive | 371954 - 372898 | 37742.9 |
| glycosyltransferase | DWY53_01410 | Not Available | Positive | 372933 - 374180 | 47343.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

