Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide export protein | DWY53_16020 | Not Available | Negative | 3712009 - 3712800 | 28981.3 |
| undecaprenyl-phosphate glucose phosphotransferase | DWY53_16025 | Not Available | Negative | 3712848 - 3714251 | 54484.1 |
| site-specific integrase | DWY53_16030 | Not Available | Negative | 3714693 - 3715604 | 35219.6 |
| hypothetical protein | DWY53_16035 | Not Available | Negative | 3715717 - 3716664 | 35988.7 |
| hypothetical protein | DWY53_16040 | Not Available | Negative | 3716688 - 3718226 | 55438.3 |
| duf3868 domain-containing protein | DWY53_16045 | Not Available | Negative | 3718257 - 3719666 | 54404.8 |
| duf3575 domain-containing protein | DWY53_16050 | Not Available | Negative | 3719673 - 3720245 | 21537.8 |
| class a beta-lactamase, subclass a2 | DWY53_16055 | Not Available | Positive | 3720342 - 3721301 | 36137.6 |
| n-acetyltransferase | DWY53_16060 | Not Available | Positive | 3721356 - 3721811 | 17405.2 |
| class i sam-dependent methyltransferase | DWY53_16065 | Not Available | Positive | 3722083 - 3722871 | 29804.4 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

