Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-l-fucose synthase | DWY53_15870 | Not Available | Negative | 3683304 - 3684386 | 41065.3 |
| gdp-mannose 4,6-dehydratase | DWY53_15875 | Not Available | Negative | 3684407 - 3685486 | 40983.1 |
| glycosyltransferase | DWY53_15880 | Not Available | Negative | 3685569 - 3686387 | 30972.0 |
| glycosyltransferase family 2 protein | DWY53_15885 | Not Available | Negative | 3686416 - 3687321 | 35782.9 |
| putative colanic acid biosynthesis acetyltransferase | DWY53_15890 | Not Available | Negative | 3687314 - 3687865 | 20806.2 |
| glycosyltransferase | DWY53_15895 | Not Available | Negative | 3687876 - 3689003 | 43013.4 |
| glycosyltransferase | DWY53_15900 | Not Available | Negative | 3689118 - 3690263 | 44571.5 |
| glycosyltransferase | DWY53_15905 | Not Available | Negative | 3690238 - 3691218 | 37643.2 |
| lipopolysaccharide biosynthesis protein | DWY53_15910 | Not Available | Negative | 3691211 - 3692311 | 43147.7 |
| hypothetical protein | DWY53_15915 | Not Available | Negative | 3692322 - 3693842 | 57864.9 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

