Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_15710 | Not Available | Positive | 3650172 - 3650612 | 16185.7 |
| sigma-70 family rna polymerase sigma factor | DWY53_15715 | Not Available | Negative | 3650774 - 3651334 | 22198.6 |
| hypothetical protein | DWY53_15720 | Not Available | Positive | 3651360 - 3651551 | 7352.87 |
| gnat family n-acetyltransferase | DWY53_15730 | Not Available | Negative | 3652293 - 3652892 | 23413.9 |
| hypothetical protein | DWY53_15735 | Not Available | Positive | 3652902 - 3653114 | 7866.65 |
| site-specific integrase | DWY53_15745 | Not Available | Negative | 3653571 - 3654806 | 47436.6 |
| arac family transcriptional regulator | DWY53_15750 | Not Available | Positive | 3655096 - 3656019 | 36234.9 |
| hypothetical protein | DWY53_15755 | Not Available | Negative | 3656094 - 3656921 | 31907.4 |
| penicillin-binding protein | DWY53_15760 | Not Available | Negative | 3657128 - 3659455 | 88345.2 |
| aspartate carbamoyltransferase | DWY53_15765 | Not Available | Positive | 3659616 - 3660557 | 36259.7 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

