Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWY53_15660 | Not Available | Negative | 3644114 - 3645328 | 46399.4 |
| hypothetical protein | DWY53_15665 | Not Available | Negative | 3645489 - 3646244 | 28176.6 |
| mobilization protein | DWY53_15670 | Not Available | Negative | 3646275 - 3647195 | 34925.8 |
| plasmid mobilization relaxosome protein mobc | DWY53_15675 | Not Available | Negative | 3647200 - 3647604 | 15058.6 |
| duf3408 domain-containing protein | DWY53_15680 | Not Available | Negative | 3647800 - 3648294 | 18355.4 |
| dna-binding protein | DWY53_15685 | Not Available | Positive | 3648855 - 3649166 | 12062.6 |
| hypothetical protein | DWY53_15690 | Not Available | Negative | 3649158 - 3649544 | 13654.3 |
| dna-binding protein | DWY53_15695 | Not Available | Positive | 3649497 - 3649820 | 12499.9 |
| hypothetical protein | DWY53_15700 | Not Available | Negative | 3649720 - 3650004 | 10912.4 |
| hypothetical protein | DWY53_15705 | Not Available | Positive | 3650014 - 3650199 | 6793.3 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

