Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF25-30LB
Accession NumberQRUD00000000.1
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | DWY53_11370 | Not Available | + | 2699648 - 2700640 | 37152.3 |
| hypothetical protein | DWY53_11375 | Not Available | + | 2700899 - 2701192 | 11116.6 |
| Hypothetical protein | DWY53_11380 | Not Available | + | 2701250 - 2701903 | 25273.2 |
| hypothetical protein | DWY53_11385 | Not Available | + | 2701872 - 2702624 | 29312.5 |
| Aaa-atpase | DWY53_11390 | Not Available | + | 2702738 - 2703310 | 22041.2 |
| Primase | DWY53_11395 | Not Available | + | 2703352 - 2704131 | 30047.8 |
| Putative nad dependent epimerase | DWY53_11400 | Not Available | + | 2704189 - 2704986 | 29937.7 |
| Terminase small subunit | DWY53_11405 | Not Available | + | 2705082 - 2705627 | 20689.6 |
| Terminase large subunit | DWY53_11410 | Not Available | + | 2705691 - 2707709 | 77524.2 |
| Portal protein | DWY53_11415 | Not Available | + | 2707838 - 2709265 | 54779.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
