Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DWY53_15505 | Not Available | Negative | 3611996 - 3612718 | 26632.1 |
| long-chain fatty acid--coa ligase | DWY53_15510 | Not Available | Negative | 3612715 - 3613923 | 45859.1 |
| acyl carrier protein | DWY53_15515 | Not Available | Negative | 3613937 - 3614161 | 8321.9 |
| ketoacyl-acp synthase iii | DWY53_15520 | Not Available | Negative | 3614166 - 3615212 | 38020.6 |
| sdr family nad(p)-dependent oxidoreductase | DWY53_15525 | Not Available | Negative | 3615219 - 3615965 | 26878.8 |
| acyl carrier protein | DWY53_15530 | Not Available | Negative | 3615965 - 3616195 | 8720.25 |
| sialic acid o-acetyltransferase | DWY53_15535 | Not Available | Negative | 3616213 - 3616848 | 22915.8 |
| degt/dnrj/eryc1/strs family aminotransferase | DWY53_15540 | Not Available | Negative | 3616854 - 3617960 | 41145.7 |
| lipopolysaccharide biosynthesis protein | DWY53_15545 | Not Available | Negative | 3617977 - 3619410 | 53506.3 |
| transcriptional regulator | DWY53_15550 | Not Available | Negative | 3619451 - 3620251 | 30553.7 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

