Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 92 protein | DWY53_15455 | Not Available | Positive | 3598305 - 3600557 | 85450.5 |
| duf4982 domain-containing protein | DWY53_15460 | Not Available | Positive | 3600560 - 3603064 | 94151.0 |
| hypothetical protein | DWY53_15465 | Not Available | Negative | 3603135 - 3603923 | 30110.2 |
| nad(p)-dependent oxidoreductase | DWY53_15470 | Not Available | Negative | 3603929 - 3604945 | 37972.1 |
| glycosyltransferase family 4 protein | DWY53_15475 | Not Available | Negative | 3604952 - 3606067 | 42897.5 |
| glycosyltransferase | DWY53_15480 | Not Available | Negative | 3606064 - 3607146 | 40950.9 |
| glycosyltransferase family 2 protein | DWY53_15485 | Not Available | Negative | 3607143 - 3607985 | 32768.0 |
| hypothetical protein | DWY53_15490 | Not Available | Negative | 3607972 - 3609183 | 47240.9 |
| alpha-1,2-fucosyltransferase | DWY53_15495 | Not Available | Negative | 3609168 - 3609968 | 31966.7 |
| glycosyltransferase family 1 protein | DWY53_15500 | Not Available | Negative | 3609992 - 3611167 | 45978.8 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

