Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_15355 | Not Available | Positive | 3567505 - 3568590 | 41253.2 |
| abc transporter atp-binding protein | DWY53_15360 | Not Available | Positive | 3568598 - 3570250 | 61635.1 |
| hypothetical protein | DWY53_15365 | Not Available | Positive | 3570234 - 3571148 | 33739.3 |
| s26 family signal peptidase | DWY53_15370 | Not Available | Positive | 3571117 - 3571584 | 18041.4 |
| duf1343 domain-containing protein | DWY53_15375 | Not Available | Negative | 3571612 - 3572772 | 43551.8 |
| hdig domain-containing protein | DWY53_15380 | Not Available | Positive | 3572826 - 3573362 | 20357.6 |
| lps-assembly protein lptd | DWY53_15385 | Not Available | Positive | 3573453 - 3576188 | 103867.0 |
| uracil-dna glycosylase | DWY53_15390 | Not Available | Negative | 3576265 - 3576927 | 24957.5 |
| aspartate--ammonia ligase | DWY53_15395 | Not Available | Negative | 3577045 - 3578085 | 39770.2 |
| Trna-arg | Not Available | Not Available | Positive | 3578288 - 3578362 | Not Available |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

