Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWY53_15305 | Not Available | Positive | 3554880 - 3556121 | 47940.3 |
| dna-binding protein | DWY53_15310 | Not Available | Positive | 3556114 - 3556350 | 9099.1 |
| hypothetical protein | DWY53_15315 | Not Available | Positive | 3557028 - 3557756 | 28470.5 |
| hypothetical protein | DWY53_15320 | Not Available | Positive | 3557828 - 3558736 | 35459.1 |
| hypothetical protein | DWY53_15325 | Not Available | Positive | 3558825 - 3559964 | 46014.6 |
| hypothetical protein | DWY53_15330 | Not Available | Negative | 3560058 - 3560624 | 21974.7 |
| hypothetical protein | DWY53_15335 | Not Available | Negative | 3561352 - 3561993 | 23898.0 |
| hypothetical protein | DWY53_15340 | Not Available | Negative | 3563047 - 3563250 | 7982.77 |
| cell surface protein | DWY53_15345 | Not Available | Positive | 3564254 - 3567085 | 98116.0 |
| pqqd family protein | DWY53_15350 | Not Available | Positive | 3567198 - 3567467 | 10032.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

