Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | DWY53_15255 | Not Available | Positive | 3544393 - 3545508 | 42519.2 |
| cyth domain-containing protein | DWY53_15260 | Not Available | Positive | 3545803 - 3546273 | 18287.6 |
| tonb-dependent receptor | DWY53_15265 | Not Available | Positive | 3546363 - 3548837 | 91599.6 |
| rna polymerase sigma factor | DWY53_15270 | Not Available | Positive | 3549006 - 3549509 | 19779.6 |
| hypothetical protein | DWY53_15275 | Not Available | Negative | 3549590 - 3549976 | 14818.4 |
| sodium-dependent transporter | DWY53_15280 | Not Available | Positive | 3550072 - 3551436 | 49159.4 |
| helix-hairpin-helix domain-containing protein | DWY53_15285 | Not Available | Positive | 3551444 - 3552346 | 35320.7 |
| alkaline phosphatase | DWY53_15290 | Not Available | Negative | 3552343 - 3553761 | 51619.1 |
| hypothetical protein | DWY53_15295 | Not Available | Positive | 3553854 - 3554048 | 7560.54 |
| hypothetical protein | DWY53_15300 | Not Available | Positive | 3554065 - 3554565 | 19273.6 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

