Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | DWY53_15155 | Not Available | Negative | 3521371 - 3522681 | 50768.5 |
| hypothetical protein | DWY53_15160 | Not Available | Positive | 3522786 - 3523409 | 24607.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DWY53_15165 | Not Available | Positive | 3523418 - 3523981 | 21334.7 |
| duf2795 domain-containing protein | DWY53_15170 | Not Available | Positive | 3524053 - 3524274 | 8716.91 |
| porin family protein | DWY53_15175 | Not Available | Positive | 3524438 - 3525037 | 21550.2 |
| primosomal protein n' | DWY53_15180 | Not Available | Positive | 3525110 - 3527572 | 93905.1 |
| phosphatase | DWY53_15185 | Not Available | Positive | 3527620 - 3528330 | 26532.1 |
| low molecular weight phosphotyrosine protein phosphatase | DWY53_15190 | Not Available | Positive | 3528338 - 3528808 | 17874.5 |
| hdig domain-containing protein | DWY53_15195 | Not Available | Negative | 3528783 - 3530840 | 79191.8 |
| glutamate--trna ligase | DWY53_15200 | Not Available | Positive | 3530922 - 3532439 | 57905.3 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

