Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | DWY53_15105 | Not Available | Negative | 3502107 - 3504266 | 80535.6 |
| radical sam family heme chaperone hemw | DWY53_15110 | Not Available | Positive | 3504503 - 3505633 | 43549.6 |
| sialate o-acetylesterase | DWY53_15115 | Not Available | Negative | 3505787 - 3507724 | 72324.6 |
| alpha-glucuronidase | DWY53_15120 | Not Available | Negative | 3507752 - 3509797 | 77280.2 |
| glycosyhydrolase | DWY53_15125 | Not Available | Negative | 3509794 - 3512388 | 99432.7 |
| glycoside hydrolase | DWY53_15130 | Not Available | Negative | 3512401 - 3513984 | 60270.6 |
| glycoside hydrolase | DWY53_15135 | Not Available | Negative | 3513993 - 3516500 | 94279.2 |
| hypothetical protein | DWY53_15140 | Not Available | Positive | 3516525 - 3516716 | 7501.54 |
| response regulator | DWY53_15145 | Not Available | Positive | 3516738 - 3520799 | 155220.0 |
| methylmalonyl-coa carboxyltransferase | DWY53_15150 | Not Available | Positive | 3520821 - 3521240 | 15488.7 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

