Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DWY53_01265 | Not Available | Positive | 331531 - 333885 | 89102.6 |
| beta-galactosidase | DWY53_01270 | Not Available | Positive | 333864 - 335978 | 81081.4 |
| glycoside hydrolase family 88 protein | DWY53_01275 | Not Available | Negative | 336097 - 337230 | 43911.1 |
| glycoside hydrolase | DWY53_01280 | Not Available | Negative | 337371 - 340658 | 122892.0 |
| silent information regulator protein sir2 | DWY53_01285 | Not Available | Negative | 340772 - 342625 | 69353.9 |
| acetylxylan esterase | DWY53_01290 | Not Available | Negative | 342641 - 343924 | 48774.1 |
| alpha-l-rhamnosidase | DWY53_01295 | Not Available | Negative | 343967 - 345748 | 66666.3 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_01300 | Not Available | Negative | 345834 - 346823 | 36430.3 |
| hypothetical protein | DWY53_01305 | Not Available | Negative | 347105 - 347293 | 7038.73 |
| hypothetical protein | DWY53_01310 | Not Available | Negative | 347926 - 348720 | 30409.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

