Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_14840 | Not Available | Positive | 3453644 - 3454336 | 26916.4 |
| hypothetical protein | DWY53_14845 | Not Available | Positive | 3454329 - 3454958 | 23652.1 |
| wyl domain-containing protein | DWY53_14850 | Not Available | Negative | 3454987 - 3455883 | 35299.5 |
| duf1273 family protein | DWY53_14855 | Not Available | Negative | 3455999 - 3456487 | 18517.7 |
| ribonucleotide-diphosphate reductase subunit alpha | DWY53_14860 | Not Available | Negative | 3456492 - 3457052 | 21526.0 |
| dna-binding protein | DWY53_14865 | Not Available | Positive | 3457815 - 3458036 | 8664.9 |
| hypothetical protein | DWY53_14870 | Not Available | Negative | 3458033 - 3458416 | 14184.1 |
| hypothetical protein | DWY53_14875 | Not Available | Negative | 3458515 - 3458874 | 13504.2 |
| hypothetical protein | DWY53_14880 | Not Available | Negative | 3458969 - 3459223 | 9134.99 |
| xre family transcriptional regulator | DWY53_14885 | Not Available | Positive | 3460075 - 3460284 | 7925.91 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

