Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_14790 | Not Available | Negative | 3441760 - 3442068 | 11434.0 |
| hypothetical protein | DWY53_14795 | Not Available | Positive | 3442639 - 3442851 | 8204.06 |
| transposase | DWY53_14800 | Not Available | Negative | 3442925 - 3444421 | 58037.7 |
| transcriptional regulator | DWY53_14805 | Not Available | Negative | 3444949 - 3445407 | 17414.0 |
| hypothetical protein | DWY53_14810 | Not Available | Positive | 3445552 - 3445743 | 7176.69 |
| hypothetical protein | DWY53_14815 | Not Available | Positive | 3445766 - 3446080 | 12579.0 |
| dna-binding protein | DWY53_14820 | Not Available | Positive | 3446275 - 3446478 | 7588.14 |
| toprim domain-containing protein | DWY53_14825 | Not Available | Positive | 3446475 - 3449690 | 122169.0 |
| dna cytosine methyltransferase | DWY53_14830 | Not Available | Positive | 3449994 - 3451238 | 47303.3 |
| atp-binding protein | DWY53_14835 | Not Available | Positive | 3451228 - 3453642 | 92429.6 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

