Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymyristoyl-acp dehydratase | DWY53_14460 | Not Available | Negative | 3365217 - 3365654 | 16453.2 |
| methyltransferase domain-containing protein | DWY53_14465 | Not Available | Negative | 3365651 - 3366721 | 40613.7 |
| acyltransferase | DWY53_14470 | Not Available | Negative | 3366735 - 3367619 | 34489.1 |
| acyl carrier protein | DWY53_14475 | Not Available | Negative | 3367619 - 3367870 | 9584.45 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DWY53_14480 | Not Available | Negative | 3367892 - 3369121 | 44242.6 |
| 3-oxoacyl-acp reductase fabg | DWY53_14485 | Not Available | Negative | 3369129 - 3369857 | 26411.8 |
| aromatic amino acid lyase | DWY53_14490 | Not Available | Negative | 3369854 - 3371425 | 59097.5 |
| cysteine--trna ligase | DWY53_14495 | Not Available | Negative | 3371613 - 3373094 | 56271.0 |
| glycoside hydrolase family 97 protein | DWY53_14500 | Not Available | Negative | 3373213 - 3375141 | 73000.9 |
| response regulator | DWY53_14505 | Not Available | Negative | 3375274 - 3379500 | 161306.0 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

