Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymyristoyl-acp dehydratase | DWY53_14410 | Not Available | Negative | 3356666 - 3357046 | 14362.7 |
| hypothetical protein | DWY53_14415 | Not Available | Negative | 3357048 - 3357590 | 20783.8 |
| outer membrane lipoprotein carrier protein lola | DWY53_14420 | Not Available | Negative | 3357565 - 3358200 | 24793.4 |
| polysaccharide deacetylase family protein | DWY53_14425 | Not Available | Negative | 3358944 - 3359636 | 26618.1 |
| kila-n domain-containing protein | DWY53_14430 | Not Available | Negative | 3359687 - 3360541 | 33301.9 |
| 3-oxoacyl-acp synthase | DWY53_14435 | Not Available | Negative | 3360655 - 3361608 | 35340.6 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DWY53_14440 | Not Available | Negative | 3361612 - 3362802 | 42106.2 |
| acyl carrier protein | DWY53_14445 | Not Available | Negative | 3362799 - 3363056 | 9574.45 |
| beta-acp synthase | DWY53_14450 | Not Available | Negative | 3363062 - 3364792 | 63687.2 |
| acyl-coa thioesterase | DWY53_14455 | Not Available | Negative | 3364777 - 3365220 | 17336.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

