Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_14360 | Not Available | Negative | 3341230 - 3342051 | 30751.9 |
| pas domain-containing protein | DWY53_14365 | Not Available | Positive | 3342250 - 3344673 | 92935.8 |
| hypothetical protein | DWY53_14370 | Not Available | Negative | 3344791 - 3345366 | 21488.1 |
| phenylacetate--coa ligase family protein | DWY53_14375 | Not Available | Negative | 3345417 - 3346712 | 49505.5 |
| choloylglycine hydrolase | DWY53_14380 | Not Available | Negative | 3346714 - 3348378 | 63193.5 |
| nad(p)/fad-dependent oxidoreductase | DWY53_14385 | Not Available | Negative | 3348371 - 3349861 | 56620.9 |
| methyltransferase domain-containing protein | DWY53_14390 | Not Available | Negative | 3349854 - 3353708 | 146384.0 |
| duf2062 domain-containing protein | DWY53_14395 | Not Available | Negative | 3353701 - 3354894 | 44766.8 |
| duf4221 domain-containing protein | DWY53_14400 | Not Available | Negative | 3355016 - 3356200 | 46111.9 |
| hypothetical protein | DWY53_14405 | Not Available | Negative | 3356273 - 3356557 | 9684.51 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

