Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | DWY53_14155 | Not Available | Positive | 3279253 - 3280167 | 33484.3 |
| threonine ammonia-lyase | DWY53_14160 | Not Available | Positive | 3280364 - 3281560 | 42410.4 |
| rsec/mucc family positive regulator of sigma(e) | DWY53_14165 | Not Available | Positive | 3281739 - 3282167 | 15752.6 |
| fe-s cluster domain-containing protein | DWY53_14170 | Not Available | Positive | 3282188 - 3283141 | 32597.8 |
| electron transport complex subunit rsxc | DWY53_14175 | Not Available | Positive | 3283181 - 3284518 | 47119.8 |
| rnfabcdge type electron transport complex subunit d | DWY53_14180 | Not Available | Positive | 3284533 - 3285522 | 35342.5 |
| rnfabcdge type electron transport complex subunit g | DWY53_14185 | Not Available | Positive | 3285519 - 3286313 | 27067.9 |
| electron transport complex subunit e | DWY53_14190 | Not Available | Positive | 3286328 - 3286912 | 20626.5 |
| electron transport complex subunit rsxa | DWY53_14195 | Not Available | Positive | 3286931 - 3287533 | 21298.3 |
| hypothetical protein | DWY53_14200 | Not Available | Positive | 3287675 - 3288571 | 33994.2 |
Pathways
343 pathways
Health Effects
No health effects information available for this bacterium.

