Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | DWY53_13995 | Not Available | Positive | 3242165 - 3244627 | 91165.9 |
| yebc/pmpr family dna-binding regulatory protein | DWY53_14000 | Not Available | Positive | 3244661 - 3245407 | 28034.9 |
| hypothetical protein | DWY53_14005 | Not Available | Negative | 3245684 - 3246352 | 25803.0 |
| hypothetical protein | DWY53_14010 | Not Available | Negative | 3246375 - 3247031 | 26127.4 |
| hypothetical protein | DWY53_14015 | Not Available | Negative | 3247083 - 3247433 | 12960.7 |
| hypothetical protein | DWY53_14020 | Not Available | Negative | 3247430 - 3247717 | 10860.1 |
| hypothetical protein | DWY53_14025 | Not Available | Positive | 3248538 - 3248795 | 9838.79 |
| duf4373 domain-containing protein | DWY53_14030 | Not Available | Positive | 3249029 - 3250609 | 59261.6 |
| toprim domain-containing protein | DWY53_14040 | Not Available | Positive | 3251122 - 3252645 | 58032.8 |
| hypothetical protein | DWY53_14045 | Not Available | Negative | 3253033 - 3253347 | 13007.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

