Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DWY53_01165 | Not Available | Positive | 304845 - 305504 | 23931.2 |
| hypothetical protein | DWY53_01170 | Not Available | Negative | 305516 - 306469 | 35136.6 |
| iron-containing alcohol dehydrogenase | DWY53_01175 | Not Available | Negative | 306552 - 307946 | 51620.1 |
| gntr family transcriptional regulator | DWY53_01180 | Not Available | Positive | 308023 - 308856 | 31856.5 |
| hypothetical protein | DWY53_01185 | Not Available | Positive | 308980 - 309933 | 38492.4 |
| tolc family protein | DWY53_01190 | Not Available | Negative | 310091 - 311407 | 49375.2 |
| efflux rnd transporter periplasmic adaptor subunit | DWY53_01195 | Not Available | Negative | 311420 - 312514 | 40051.5 |
| abc transporter permease | DWY53_01200 | Not Available | Negative | 312588 - 313829 | 45551.9 |
| abc transporter permease | DWY53_01205 | Not Available | Negative | 313834 - 315090 | 46605.0 |
| abc transporter atp-binding protein | DWY53_01210 | Not Available | Negative | 315100 - 315819 | 26742.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

