Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DWY53_13835 | Not Available | Negative | 3203411 - 3205735 | 86932.1 |
| abc transporter permease | DWY53_13840 | Not Available | Negative | 3205750 - 3208062 | 87457.1 |
| abc transporter atp-binding protein | DWY53_13845 | Not Available | Negative | 3208082 - 3208756 | 24853.2 |
| abc transporter permease | DWY53_13850 | Not Available | Negative | 3208791 - 3211100 | 86414.7 |
| m3 family peptidase | DWY53_13855 | Not Available | Positive | 3211422 - 3213527 | 79164.9 |
| acyltransferase | DWY53_13860 | Not Available | Positive | 3213708 - 3214868 | 44353.2 |
| hypothetical protein | DWY53_13865 | Not Available | Negative | 3214975 - 3215829 | 31763.9 |
| hypothetical protein | DWY53_13870 | Not Available | Positive | 3215836 - 3216066 | 9075.28 |
| glycosyltransferase | DWY53_13875 | Not Available | Negative | 3215970 - 3216683 | 27581.0 |
| glycosyltransferase | DWY53_13880 | Not Available | Negative | 3216715 - 3217887 | 45303.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

