Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_13780 | Not Available | Negative | 3193706 - 3194236 | 20186.3 |
| duf4252 domain-containing protein | DWY53_13790 | Not Available | Negative | 3194720 - 3195205 | 18464.7 |
| sdr family nad(p)-dependent oxidoreductase | DWY53_13795 | Not Available | Negative | 3195542 - 3196270 | 27098.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DWY53_13800 | Not Available | Negative | 3196281 - 3197558 | 47021.8 |
| acyl-coa thioesterase | DWY53_13805 | Not Available | Positive | 3197681 - 3198124 | 16882.2 |
| duf1573 domain-containing protein | DWY53_13810 | Not Available | Negative | 3198189 - 3198917 | 27262.7 |
| duf4221 domain-containing protein | DWY53_13815 | Not Available | Negative | 3198914 - 3200068 | 45151.7 |
| hypothetical protein | DWY53_13820 | Not Available | Negative | 3200184 - 3200450 | 9793.29 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DWY53_13825 | Not Available | Positive | 3200780 - 3202636 | 68719.0 |
| hypothetical protein | DWY53_13830 | Not Available | Positive | 3202913 - 3203350 | 17467.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

