Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | DWY53_13730 | Not Available | Positive | 3185608 - 3185988 | 14121.3 |
| 30s ribosomal protein s11 | DWY53_13735 | Not Available | Positive | 3186000 - 3186389 | 13878.8 |
| 30s ribosomal protein s4 | DWY53_13740 | Not Available | Positive | 3186506 - 3187111 | 22540.2 |
| dna-directed rna polymerase subunit alpha | DWY53_13745 | Not Available | Positive | 3187123 - 3188115 | 37535.1 |
| 50s ribosomal protein l17 | DWY53_13750 | Not Available | Positive | 3188119 - 3188607 | 17965.6 |
| hypothetical protein | DWY53_13755 | Not Available | Positive | 3189018 - 3189443 | 15788.1 |
| hypothetical protein | DWY53_13760 | Not Available | Positive | 3189562 - 3190101 | 19772.7 |
| hypothetical protein | DWY53_13765 | Not Available | Negative | 3190196 - 3191995 | 68633.8 |
| hypothetical protein | DWY53_13770 | Not Available | Positive | 3192325 - 3192996 | 23981.6 |
| duf4252 domain-containing protein | DWY53_13775 | Not Available | Negative | 3193251 - 3193709 | 17333.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

