Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | DWY53_13680 | Not Available | Positive | 3180537 - 3180932 | 14565.0 |
| 50s ribosomal protein l6 | DWY53_13685 | Not Available | Positive | 3180947 - 3181516 | 20910.5 |
| 50s ribosomal protein l18 | DWY53_13690 | Not Available | Positive | 3181538 - 3181879 | 12645.5 |
| 30s ribosomal protein s5 | DWY53_13695 | Not Available | Positive | 3181883 - 3182401 | 17941.0 |
| 50s ribosomal protein l30 | DWY53_13700 | Not Available | Positive | 3182411 - 3182587 | 6433.21 |
| 50s ribosomal protein l15 | DWY53_13705 | Not Available | Positive | 3182618 - 3183064 | 15681.0 |
| preprotein translocase subunit secy | DWY53_13710 | Not Available | Positive | 3183069 - 3184415 | 49282.7 |
| type i methionyl aminopeptidase | DWY53_13715 | Not Available | Positive | 3184426 - 3185223 | 29142.0 |
| translation initiation factor if-1 | DWY53_13720 | Not Available | Positive | 3185225 - 3185443 | 8235.14 |
| 50s ribosomal protein l36 | DWY53_13725 | Not Available | Positive | 3185458 - 3185574 | 4586.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

