Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s19 | DWY53_13630 | Not Available | Positive | 3176524 - 3176793 | 9895.23 |
| 50s ribosomal protein l22 | DWY53_13635 | Not Available | Positive | 3176830 - 3177240 | 15484.9 |
| 30s ribosomal protein s3 | DWY53_13640 | Not Available | Positive | 3177247 - 3177978 | 27103.1 |
| 50s ribosomal protein l16 | DWY53_13645 | Not Available | Positive | 3178000 - 3178434 | 16206.8 |
| 50s ribosomal protein l29 | DWY53_13650 | Not Available | Positive | 3178441 - 3178635 | 7453.1 |
| 30s ribosomal protein s17 | DWY53_13655 | Not Available | Positive | 3178647 - 3178904 | 9981.21 |
| 50s ribosomal protein l14 | DWY53_13660 | Not Available | Positive | 3178907 - 3179272 | 13058.1 |
| 50s ribosomal protein l24 | DWY53_13665 | Not Available | Positive | 3179293 - 3179616 | 11658.2 |
| 50s ribosomal protein l5 | DWY53_13670 | Not Available | Positive | 3179616 - 3180173 | 20860.8 |
| 30s ribosomal protein s14 | DWY53_13675 | Not Available | Positive | 3180180 - 3180479 | 11077.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

