Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | DWY53_13580 | Not Available | Positive | 3165494 - 3169780 | 158848.0 |
| duf3467 domain-containing protein | DWY53_13585 | Not Available | Positive | 3169989 - 3170330 | 12561.0 |
| 30s ribosomal protein s12 | DWY53_13590 | Not Available | Positive | 3170519 - 3170932 | 14994.4 |
| 30s ribosomal protein s7 | DWY53_13595 | Not Available | Positive | 3171081 - 3171557 | 18204.1 |
| elongation factor g | DWY53_13600 | Not Available | Positive | 3171589 - 3173706 | 77460.5 |
| 30s ribosomal protein s10 | DWY53_13605 | Not Available | Positive | 3173792 - 3174097 | 11419.0 |
| 50s ribosomal protein l3 | DWY53_13610 | Not Available | Positive | 3174119 - 3174736 | 21900.8 |
| 50s ribosomal protein l4 | DWY53_13615 | Not Available | Positive | 3174736 - 3175362 | 23045.8 |
| 50s ribosomal protein l23 | DWY53_13620 | Not Available | Positive | 3175384 - 3175674 | 10804.2 |
| 50s ribosomal protein l2 | DWY53_13625 | Not Available | Positive | 3175680 - 3176501 | 29634.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

