Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 3157163 - 3157234 | Not Available |
| elongation factor tu | DWY53_13535 | Not Available | Positive | 3157286 - 3158470 | 43565.6 |
| Trna-trp | Not Available | Not Available | Positive | 3158528 - 3158603 | Not Available |
| preprotein translocase subunit sece | DWY53_13545 | Not Available | Positive | 3158617 - 3158811 | 7402.06 |
| transcription termination/antitermination factor nusg | DWY53_13550 | Not Available | Positive | 3158825 - 3159367 | 20140.3 |
| 50s ribosomal protein l11 | DWY53_13555 | Not Available | Positive | 3159428 - 3159871 | 15797.5 |
| 50s ribosomal protein l1 | DWY53_13560 | Not Available | Positive | 3159887 - 3160585 | 24935.6 |
| 50s ribosomal protein l10 | DWY53_13565 | Not Available | Positive | 3160601 - 3161119 | 18678.8 |
| 50s ribosomal protein l7/l12 | DWY53_13570 | Not Available | Positive | 3161166 - 3161540 | 12654.2 |
| dna-directed rna polymerase subunit beta | DWY53_13575 | Not Available | Positive | 3161643 - 3165455 | 142511.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

