Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhum protein | DWY53_13430 | Not Available | Positive | 3144634 - 3144996 | 13808.0 |
| helicase | DWY53_13435 | Not Available | Negative | 3145099 - 3147222 | 81757.5 |
| duf1837 domain-containing protein | DWY53_13440 | Not Available | Negative | 3147206 - 3148147 | 36379.3 |
| xre family transcriptional regulator | DWY53_13445 | Not Available | Negative | 3148200 - 3148403 | 7690.41 |
| dna-binding protein | DWY53_13450 | Not Available | Negative | 3148594 - 3148899 | 11817.2 |
| dna-binding protein | DWY53_13455 | Not Available | Negative | 3148931 - 3149230 | 11628.3 |
| hypothetical protein | DWY53_13460 | Not Available | Negative | 3149270 - 3149416 | 5210.01 |
| dna-binding protein | DWY53_13465 | Not Available | Positive | 3149511 - 3149867 | 13247.0 |
| dna-binding protein | DWY53_13470 | Not Available | Positive | 3149871 - 3150221 | 13925.0 |
| duf4099 domain-containing protein | DWY53_13475 | Not Available | Positive | 3150242 - 3151810 | 59879.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

