Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | DWY53_13380 | Not Available | Positive | 3133797 - 3134927 | 42665.6 |
| yjgp/yjgq family permease | DWY53_13385 | Not Available | Positive | 3134938 - 3136110 | 45473.9 |
| had family phosphatase | DWY53_13390 | Not Available | Negative | 3136111 - 3136731 | 23389.8 |
| hypothetical protein | DWY53_13395 | Not Available | Negative | 3136890 - 3137384 | 18386.1 |
| phosphoserine phosphatase serb | DWY53_13400 | Not Available | Positive | 3137657 - 3138889 | 46069.1 |
| dead/deah box helicase | DWY53_13405 | Not Available | Positive | 3138910 - 3140187 | 47491.1 |
| hypothetical protein | DWY53_13410 | Not Available | Negative | 3140573 - 3140848 | 10175.2 |
| duf4738 domain-containing protein | DWY53_13415 | Not Available | Negative | 3140898 - 3141686 | 29405.2 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DWY53_13420 | Not Available | Negative | 3141710 - 3143023 | 48150.3 |
| site-specific integrase | DWY53_13425 | Not Available | Positive | 3143386 - 3144621 | 47984.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

