Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m15 | DWY53_13280 | Not Available | Positive | 3106544 - 3106942 | 15087.0 |
| hypothetical protein | DWY53_13285 | Not Available | Positive | 3107109 - 3107651 | 20218.4 |
| hypothetical protein | DWY53_13290 | Not Available | Positive | 3107950 - 3108189 | 9163.08 |
| hypothetical protein | DWY53_13295 | Not Available | Negative | 3108257 - 3109579 | 51191.6 |
| Trna-pro | Not Available | Not Available | Positive | 3109654 - 3109731 | Not Available |
| atp-binding protein | DWY53_13305 | Not Available | Negative | 3109891 - 3111222 | 50551.9 |
| sigma-54-dependent fis family transcriptional regulator | DWY53_13310 | Not Available | Negative | 3111219 - 3112586 | 51867.0 |
| sel1 repeat family protein | DWY53_13315 | Not Available | Positive | 3112810 - 3113733 | 34904.5 |
| tolc family protein | DWY53_13320 | Not Available | Positive | 3113783 - 3115252 | 55811.2 |
| hlyd family efflux transporter periplasmic adaptor subunit | DWY53_13325 | Not Available | Positive | 3115336 - 3116586 | 48108.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

