Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | DWY53_13230 | Not Available | Negative | 3100254 - 3101381 | 42775.5 |
| 4fe-4s dicluster domain-containing protein | DWY53_13235 | Not Available | Negative | 3101381 - 3102160 | 28476.2 |
| arac family transcriptional regulator | DWY53_13240 | Not Available | Positive | 3102753 - 3103017 | 10101.9 |
| site-specific integrase | DWY53_13245 | Not Available | Negative | 3103018 - 3103400 | 14750.9 |
| hypothetical protein | DWY53_13250 | Not Available | Positive | 3103918 - 3104328 | 14954.1 |
| hypothetical protein | DWY53_13255 | Not Available | Negative | 3104411 - 3104599 | 7283.53 |
| hypothetical protein | DWY53_13260 | Not Available | Negative | 3104723 - 3105148 | 15547.0 |
| hypothetical protein | DWY53_13265 | Not Available | Negative | 3105173 - 3105451 | 10247.3 |
| hypothetical protein | DWY53_13270 | Not Available | Negative | 3105680 - 3105883 | 7873.46 |
| hypothetical protein | DWY53_13275 | Not Available | Positive | 3105976 - 3106452 | 17986.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

