Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | DWY53_13130 | Not Available | Positive | 3070832 - 3071608 | 29006.1 |
| hypothetical protein | DWY53_13135 | Not Available | Positive | 3071685 - 3072341 | 24627.2 |
| duf2851 family protein | DWY53_13140 | Not Available | Negative | 3072406 - 3073671 | 48614.4 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DWY53_13145 | Not Available | Positive | 3073755 - 3074510 | 27422.6 |
| s26 family signal peptidase | DWY53_13150 | Not Available | Positive | 3074514 - 3075938 | 55209.5 |
| signal peptidase i | DWY53_13155 | Not Available | Positive | 3075976 - 3076839 | 32796.6 |
| hypothetical protein | DWY53_13160 | Not Available | Positive | 3076839 - 3077495 | 25602.4 |
| sdr family nad(p)-dependent oxidoreductase | DWY53_13165 | Not Available | Positive | 3077500 - 3078312 | 28669.7 |
| mannonate dehydratase | DWY53_13170 | Not Available | Positive | 3078352 - 3079527 | 44526.6 |
| tonb-dependent receptor | DWY53_13175 | Not Available | Positive | 3079742 - 3082963 | 118849.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

