Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3871 family protein | DWY53_13075 | Not Available | Negative | 3057742 - 3058755 | 38228.7 |
| winged helix-turn-helix transcriptional regulator | DWY53_13080 | Not Available | Negative | 3058957 - 3059772 | 31264.0 |
| hypothetical protein | DWY53_13085 | Not Available | Negative | 3059822 - 3060007 | 7373.69 |
| hypothetical protein | DWY53_13090 | Not Available | Negative | 3060314 - 3060496 | 7231.85 |
| hypothetical protein | DWY53_13095 | Not Available | Negative | 3060941 - 3061372 | 17031.0 |
| hypothetical protein | DWY53_13100 | Not Available | Negative | 3061402 - 3062289 | 33206.8 |
| hypothetical protein | DWY53_13105 | Not Available | Negative | 3062525 - 3063541 | 40216.3 |
| recombinase family protein | DWY53_13110 | Not Available | Negative | 3063601 - 3065277 | 63892.3 |
| lactaldehyde reductase | DWY53_13120 | Not Available | Positive | 3066244 - 3067398 | 40917.7 |
| tonb-dependent receptor | DWY53_13125 | Not Available | Positive | 3067601 - 3070804 | 118638.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

