Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | DWY53_13015 | Not Available | Positive | 3047868 - 3048818 | 36526.2 |
| tpm domain-containing protein | DWY53_13020 | Not Available | Positive | 3048815 - 3049735 | 33346.0 |
| lema family protein | DWY53_13025 | Not Available | Positive | 3049772 - 3050353 | 21752.9 |
| chorismate synthase | DWY53_13030 | Not Available | Positive | 3050562 - 3051638 | 39168.8 |
| dipeptidase | DWY53_13035 | Not Available | Positive | 3051652 - 3053004 | 49852.0 |
| nitroreductase family protein | DWY53_13040 | Not Available | Positive | 3053017 - 3053646 | 23122.0 |
| hypothetical protein | DWY53_13050 | Not Available | Negative | 3054830 - 3055297 | 17830.5 |
| hypothetical protein | DWY53_13055 | Not Available | Negative | 3055319 - 3055954 | 24518.7 |
| hypothetical protein | DWY53_13065 | Not Available | Negative | 3056558 - 3056764 | 8074.19 |
| site-specific integrase | DWY53_13070 | Not Available | Negative | 3056843 - 3057430 | 22544.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

