Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_12865 | Not Available | Negative | 3009006 - 3009455 | 17049.0 |
| hypothetical protein | DWY53_12870 | Not Available | Negative | 3009526 - 3010518 | 37676.2 |
| preprotein translocase subunit seca | DWY53_12875 | Not Available | Negative | 3010641 - 3013937 | 125101.0 |
| alkaline phosphatase family protein | DWY53_12880 | Not Available | Negative | 3014033 - 3015616 | 59448.7 |
| duf4105 domain-containing protein | DWY53_12885 | Not Available | Negative | 3015613 - 3016788 | 44972.2 |
| type iii pantothenate kinase | DWY53_12890 | Not Available | Positive | 3016915 - 3017643 | 26911.9 |
| hypothetical protein | DWY53_12895 | Not Available | Positive | 3017630 - 3018946 | 49216.0 |
| tetratricopeptide repeat protein | DWY53_12900 | Not Available | Positive | 3018993 - 3020348 | 50268.8 |
| lps export abc transporter periplasmic protein lptc | DWY53_12905 | Not Available | Positive | 3020351 - 3020995 | 24876.2 |
| hlyc/corc family transporter | DWY53_12910 | Not Available | Positive | 3021009 - 3022268 | 47647.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

