Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | DWY53_12815 | Not Available | Positive | 2996337 - 2999090 | 100894.0 |
| nucleotidyltransferase family protein | DWY53_12820 | Not Available | Negative | 2999286 - 3000131 | 32109.8 |
| phosphotransferase | DWY53_12825 | Not Available | Negative | 3000128 - 3001558 | 55485.1 |
| purine permease | DWY53_12830 | Not Available | Negative | 3001661 - 3002992 | 46614.3 |
| xanthine phosphoribosyltransferase | DWY53_12835 | Not Available | Negative | 3002997 - 3003563 | 20888.7 |
| nucleoside triphosphate pyrophosphohydrolase | DWY53_12840 | Not Available | Negative | 3003721 - 3004509 | 30701.6 |
| valine--trna ligase | DWY53_12845 | Not Available | Positive | 3004617 - 3007244 | 99731.5 |
| hypothetical protein | DWY53_12850 | Not Available | Negative | 3007425 - 3007865 | 16227.5 |
| sigma-70 family rna polymerase sigma factor | DWY53_12855 | Not Available | Positive | 3008012 - 3008557 | 21010.2 |
| hypothetical protein | DWY53_12860 | Not Available | Positive | 3008554 - 3008931 | 14902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

