Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_12765 | Not Available | Negative | 2987374 - 2987553 | 6795.28 |
| hypothetical protein | DWY53_12770 | Not Available | Negative | 2987498 - 2987620 | 4290.01 |
| hypothetical protein | DWY53_12775 | Not Available | Negative | 2987925 - 2989631 | 63732.5 |
| fimbrillin family protein | DWY53_12780 | Not Available | Negative | 2989697 - 2990767 | 39488.9 |
| fimbrillin family protein | DWY53_12785 | Not Available | Negative | 2990897 - 2992036 | 42158.0 |
| duf5119 domain-containing protein | DWY53_12790 | Not Available | Negative | 2992080 - 2993087 | 37830.5 |
| hypothetical protein | DWY53_12795 | Not Available | Negative | 2993084 - 2993422 | 13051.2 |
| recombinase | DWY53_12800 | Not Available | Negative | 2993815 - 2994903 | 41882.2 |
| duf1282 domain-containing protein | DWY53_12805 | Not Available | Positive | 2995278 - 2995847 | 21095.3 |
| ssra-binding protein | DWY53_12810 | Not Available | Positive | 2995847 - 2996299 | 17572.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

