Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_12710 | Not Available | Positive | 2974902 - 2975261 | 13797.3 |
| dna/rna non-specific endonuclease | DWY53_12720 | Not Available | Positive | 2978320 - 2979111 | 30496.7 |
| hypothetical protein | DWY53_12725 | Not Available | Positive | 2979116 - 2979568 | 17457.2 |
| site-specific integrase | DWY53_12730 | Not Available | Negative | 2979815 - 2980921 | 42978.7 |
| gggtgrt protein | DWY53_12735 | Not Available | Negative | 2981266 - 2982276 | 35757.9 |
| hypothetical protein | DWY53_12740 | Not Available | Negative | 2982295 - 2982996 | 25285.6 |
| duf4375 domain-containing protein | DWY53_12745 | Not Available | Positive | 2983233 - 2983742 | 19574.0 |
| sodium:glutamate symporter | DWY53_12750 | Not Available | Negative | 2983912 - 2985291 | 49927.3 |
| hypothetical protein | DWY53_12755 | Not Available | Negative | 2985506 - 2986120 | 23056.4 |
| hypothetical protein | DWY53_12760 | Not Available | Positive | 2986468 - 2987223 | 27755.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

