Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWY53_12660 | Not Available | Positive | 2961357 - 2962559 | 46480.3 |
| hypothetical protein | DWY53_12665 | Not Available | Positive | 2962821 - 2964176 | 51435.4 |
| hypothetical protein | DWY53_12670 | Not Available | Positive | 2964195 - 2964584 | 14298.1 |
| hypothetical protein | DWY53_12675 | Not Available | Positive | 2964596 - 2966194 | 60236.6 |
| hypothetical protein | DWY53_12680 | Not Available | Positive | 2966201 - 2969590 | 127733.0 |
| hypothetical protein | DWY53_12685 | Not Available | Positive | 2969590 - 2972232 | 102750.0 |
| hypothetical protein | DWY53_12690 | Not Available | Positive | 2972292 - 2972870 | 21275.2 |
| hypothetical protein | DWY53_12695 | Not Available | Positive | 2972892 - 2973473 | 21457.3 |
| hypothetical protein | DWY53_12700 | Not Available | Positive | 2973475 - 2974074 | 21726.7 |
| hypothetical protein | DWY53_12705 | Not Available | Positive | 2974310 - 2974894 | 22518.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

