Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_12545 | Not Available | Negative | 2945807 - 2946007 | 7616.24 |
| hypothetical protein | DWY53_12555 | Not Available | Positive | 2946384 - 2946605 | 8197.77 |
| hypothetical protein | DWY53_12560 | Not Available | Positive | 2946618 - 2947190 | 22087.8 |
| hypothetical protein | DWY53_12565 | Not Available | Negative | 2947487 - 2947972 | 18462.3 |
| duf4065 domain-containing protein | DWY53_12570 | Not Available | Negative | 2947978 - 2948535 | 21055.2 |
| dna methylase | DWY53_12580 | Not Available | Positive | 2949108 - 2953145 | 153759.0 |
| duf3307 domain-containing protein | DWY53_12590 | Not Available | Negative | 2953442 - 2954131 | 25373.6 |
| rna polymerase subunit sigma-70 | DWY53_12595 | Not Available | Negative | 2954124 - 2954783 | 24716.0 |
| dna-binding protein | DWY53_12600 | Not Available | Negative | 2954991 - 2955323 | 12838.3 |
| dna-binding protein | DWY53_12605 | Not Available | Negative | 2955320 - 2955697 | 14474.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

