Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_12490 | Not Available | Negative | 2938383 - 2939951 | 59310.8 |
| hypothetical protein | DWY53_12495 | Not Available | Negative | 2939977 - 2940201 | 8699.02 |
| duf4099 domain-containing protein | DWY53_12500 | Not Available | Negative | 2940222 - 2940980 | 28759.2 |
| m23 family peptidase | DWY53_12505 | Not Available | Positive | 2941201 - 2941860 | 24184.8 |
| phosphoribosyltransferase | DWY53_12510 | Not Available | Negative | 2941893 - 2942729 | 32541.7 |
| hypothetical protein | DWY53_12515 | Not Available | Positive | 2943038 - 2943268 | 8356.18 |
| hypothetical protein | DWY53_12520 | Not Available | Positive | 2943269 - 2943436 | 6396.83 |
| ribonucleotide-diphosphate reductase subunit alpha | DWY53_12525 | Not Available | Positive | 2943729 - 2944295 | 21448.5 |
| duf1273 family protein | DWY53_12530 | Not Available | Positive | 2944297 - 2944800 | 18989.0 |
| deaminase | DWY53_12540 | Not Available | Negative | 2945142 - 2945627 | 17395.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

