Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosaminidase | DWY53_12440 | Not Available | Negative | 2927350 - 2928906 | 57506.6 |
| duf1738 domain-containing protein | DWY53_12445 | Not Available | Negative | 2928918 - 2931116 | 84303.7 |
| hypothetical protein | DWY53_12450 | Not Available | Negative | 2931189 - 2932979 | 66346.2 |
| hypothetical protein | DWY53_12455 | Not Available | Negative | 2932994 - 2933275 | 11239.2 |
| m23 family peptidase | DWY53_12460 | Not Available | Negative | 2933299 - 2934129 | 30943.2 |
| hypothetical protein | DWY53_12465 | Not Available | Negative | 2934157 - 2934801 | 21799.2 |
| hypothetical protein | DWY53_12470 | Not Available | Negative | 2934814 - 2935500 | 26494.3 |
| hypothetical protein | DWY53_12475 | Not Available | Negative | 2935513 - 2936208 | 25763.9 |
| ph domain-containing protein | DWY53_12480 | Not Available | Negative | 2936189 - 2936674 | 18921.6 |
| hypothetical protein | DWY53_12485 | Not Available | Negative | 2936687 - 2938378 | 64616.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

