Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_12270 | Not Available | Positive | 2906526 - 2906786 | 10446.6 |
| hypothetical protein | DWY53_12275 | Not Available | Negative | 2906764 - 2907039 | 10556.7 |
| hypothetical protein | DWY53_12280 | Not Available | Positive | 2907166 - 2907474 | 11966.7 |
| single-stranded dna-binding protein | DWY53_12285 | Not Available | Positive | 2907471 - 2907851 | 14553.5 |
| hypothetical protein | DWY53_12290 | Not Available | Positive | 2908340 - 2908873 | 20580.6 |
| hypothetical protein | DWY53_12300 | Not Available | Positive | 2909332 - 2909646 | 12754.8 |
| hypothetical protein | DWY53_12305 | Not Available | Positive | 2909642 - 2909980 | 12870.8 |
| duf4313 domain-containing protein | DWY53_12310 | Not Available | Positive | 2910067 - 2910567 | 19324.7 |
| hypothetical protein | DWY53_12315 | Not Available | Positive | 2911056 - 2911310 | 10094.1 |
| hypothetical protein | DWY53_12325 | Not Available | Positive | 2911781 - 2912461 | 26184.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

