Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_12120 | Not Available | Negative | 2868028 - 2868780 | 29433.6 |
| glycosyltransferase family 2 protein | DWY53_12125 | Not Available | Negative | 2868796 - 2869512 | 27429.8 |
| udp-galactopyranose mutase | DWY53_12130 | Not Available | Negative | 2869596 - 2870702 | 42925.6 |
| acetyltransferase | DWY53_12135 | Not Available | Negative | 2870705 - 2871628 | 37581.7 |
| glycosyltransferase family 9 protein | DWY53_12140 | Not Available | Negative | 2871629 - 2872660 | 38572.1 |
| 4-phosphoerythronate dehydrogenase pdxb | DWY53_12145 | Not Available | Positive | 2872765 - 2873790 | 38367.9 |
| duf4249 domain-containing protein | DWY53_12150 | Not Available | Negative | 2873955 - 2874920 | 36386.1 |
| tonb-dependent receptor | DWY53_12155 | Not Available | Negative | 2874927 - 2877581 | 100814.0 |
| fecr family protein | DWY53_12160 | Not Available | Negative | 2877578 - 2878381 | 30911.8 |
| rna polymerase sigma-70 factor | DWY53_12165 | Not Available | Negative | 2878451 - 2878960 | 19967.9 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

